Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm43186-201ENSMUST00000198130 824 ntBASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm25517-201ENSMUST00000083865 134 ntBASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm23912-201ENSMUST00000104687 87 ntBASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm16071-201ENSMUST00000119589 793 ntBASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm17826-201ENSMUST00000189720 798 ntBASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Snrnp40Q6PE01 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms