Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gm6447-201ENSMUST00000118905 835 ntBASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf220Q6PDX6 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.58□□□□□ -0.55
Rnf220Q6PDX6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf220Q6PDX6 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf220Q6PDX6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm15371-201ENSMUST00000117057 784 ntBASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms