Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm42518-201ENSMUST00000196277 938 ntBASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm23218-201ENSMUST00000158124 276 ntBASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd4Q6PDQ2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd4Q6PDQ2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm12516-201ENSMUST00000120819 385 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm6722-201ENSMUST00000221586 390 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm26013-201ENSMUST00000104404 119 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm23153-201ENSMUST00000175323 313 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms