Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Casc4Q6P2L7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm23270-201ENSMUST00000104055 131 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm31256-201ENSMUST00000194705 506 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Casc4Q6P2L7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm13350-201ENSMUST00000120519 479 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm14381-201ENSMUST00000122105 414 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm24136-201ENSMUST00000083374 165 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casc4Q6P2L7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms