Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gm15528-201ENSMUST00000117821 864 ntBASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gm25554-201ENSMUST00000158075 113 ntBASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Gm37638-201ENSMUST00000194337 1123 ntBASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC20.89■□□□□ 0.94
Smarca2Q6DIC0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 BC106175-202ENSMUST00000219344 1213 ntBASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Smarca2Q6DIC0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm15549-201ENSMUST00000121595 622 ntBASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm13445-201ENSMUST00000121664 307 ntBASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 AC153929.1-201ENSMUST00000219009 303 ntBASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Gm14132-201ENSMUST00000117188 1719 ntBASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca2Q6DIC0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Gm9081-201ENSMUST00000182346 991 ntBASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca2Q6DIC0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms