Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.06□□□□□ -0.48
VclQ64727 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.06□□□□□ -0.48
VclQ64727 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.06□□□□□ -0.48
VclQ64727 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.06□□□□□ -0.48
VclQ64727 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.06□□□□□ -0.48
VclQ64727 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.06□□□□□ -0.48
VclQ64727 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.06□□□□□ -0.48
VclQ64727 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.06□□□□□ -0.48
VclQ64727 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
VclQ64727 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
VclQ64727 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VclQ64727 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.05□□□□□ -0.48
VclQ64727 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
VclQ64727 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.05□□□□□ -0.48
VclQ64727 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VclQ64727 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
VclQ64727 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.05□□□□□ -0.48
VclQ64727 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.05□□□□□ -0.48
VclQ64727 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Gm9996-201ENSMUST00000070359 913 ntBASIC12.05□□□□□ -0.48
VclQ64727 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.05□□□□□ -0.48
VclQ64727 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.05□□□□□ -0.48
VclQ64727 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VclQ64727 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.05□□□□□ -0.48
VclQ64727 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VclQ64727 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VclQ64727 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.05□□□□□ -0.48
VclQ64727 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VclQ64727 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VclQ64727 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Pck2-205ENSMUST00000226352 2784 ntBASIC12.04□□□□□ -0.48
VclQ64727 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VclQ64727 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms