Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VcanQ62059 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VcanQ62059 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VcanQ62059 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.17□□□□□ -0.62
VcanQ62059 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.17□□□□□ -0.62
VcanQ62059 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VcanQ62059 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
VcanQ62059 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.17□□□□□ -0.62
VcanQ62059 Gm6606-201ENSMUST00000193613 947 ntBASIC11.17□□□□□ -0.62
VcanQ62059 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.17□□□□□ -0.62
VcanQ62059 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VcanQ62059 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VcanQ62059 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VcanQ62059 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.16□□□□□ -0.62
VcanQ62059 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 Gm25554-201ENSMUST00000158075 113 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm4310-201ENSMUST00000177847 889 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.16□□□□□ -0.62
VcanQ62059 Gm44315-201ENSMUST00000203041 219 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.16□□□□□ -0.62
VcanQ62059 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.16□□□□□ -0.62
VcanQ62059 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VcanQ62059 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VcanQ62059 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
VcanQ62059 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Gm8152-201ENSMUST00000120842 637 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Gm5190-201ENSMUST00000192434 357 ntBASIC11.16□□□□□ -0.62
VcanQ62059 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.16□□□□□ -0.62
VcanQ62059 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.16□□□□□ -0.62
VcanQ62059 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VcanQ62059 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Gm11244-201ENSMUST00000121243 237 ntBASIC11.15□□□□□ -0.62
VcanQ62059 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.15□□□□□ -0.62
VcanQ62059 Gm20493-201ENSMUST00000173706 213 ntBASIC11.15□□□□□ -0.62
VcanQ62059 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.15□□□□□ -0.62
VcanQ62059 Gm45113-201ENSMUST00000207518 165 ntBASIC11.15□□□□□ -0.62
VcanQ62059 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.15□□□□□ -0.62
VcanQ62059 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VcanQ62059 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.15□□□□□ -0.62
VcanQ62059 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms