Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm13612-201ENSMUST00000119276 390 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Gm12363-201ENSMUST00000122250 668 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.44□□□□□ -0.58
Sox17Q61473 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sox17Q61473 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.44□□□□□ -0.58
Sox17Q61473 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Sox17Q61473 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sox17Q61473 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.44□□□□□ -0.58
Sox17Q61473 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox17Q61473 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.43□□□□□ -0.58
Sox17Q61473 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Sox17Q61473 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm11964-201ENSMUST00000120982 444 ntBASIC11.43□□□□□ -0.58
Sox17Q61473 Gm11597-201ENSMUST00000121423 964 ntBASIC11.43□□□□□ -0.58
Sox17Q61473 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Sox17Q61473 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Sox17Q61473 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox17Q61473 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.43□□□□□ -0.58
Sox17Q61473 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox17Q61473 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox17Q61473 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms