Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.53□□□□□ -0.4
Slc6a4Q60857 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a4Q60857 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm14247-201ENSMUST00000120950 237 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Mir6979-201ENSMUST00000183927 56 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm4034-201ENSMUST00000187674 480 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm4607-201ENSMUST00000206649 577 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm17827-201ENSMUST00000211825 742 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a4Q60857 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.52□□□□□ -0.41
Slc6a4Q60857 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm12266-201ENSMUST00000120311 962 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 AU022133-201ENSMUST00000200601 873 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.51□□□□□ -0.41
Slc6a4Q60857 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a4Q60857 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Gm12566-201ENSMUST00000121479 359 ntBASIC12.5□□□□□ -0.41
Slc6a4Q60857 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.5□□□□□ -0.41
Slc6a4Q60857 Gm18753-201ENSMUST00000201000 566 ntBASIC12.5□□□□□ -0.41
Slc6a4Q60857 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms