Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.68□□□□□ -0.54
Nr1h4Q60641 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm11964-201ENSMUST00000120982 444 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm12363-201ENSMUST00000122250 668 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Mir1894-201ENSMUST00000122802 81 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm9022-201ENSMUST00000182482 992 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.67□□□□□ -0.54
Nr1h4Q60641 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.67□□□□□ -0.54
Nr1h4Q60641 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nr1h4Q60641 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.66□□□□□ -0.54
Nr1h4Q60641 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms