Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Prdm1Q60636 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.27□□□□□ -0.12
Prdm1Q60636 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.27□□□□□ -0.12
Prdm1Q60636 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prdm1Q60636 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Mir877-201ENSMUST00000104738 85 ntBASIC14.27□□□□□ -0.13
Prdm1Q60636 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.27□□□□□ -0.13
Prdm1Q60636 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.27□□□□□ -0.13
Prdm1Q60636 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.27□□□□□ -0.13
Prdm1Q60636 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.27□□□□□ -0.13
Prdm1Q60636 Gm44651-201ENSMUST00000207343 372 ntBASIC14.27□□□□□ -0.13
Prdm1Q60636 Gm45598-202ENSMUST00000210719 986 ntBASIC14.27□□□□□ -0.13
Prdm1Q60636 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.27□□□□□ -0.13
Prdm1Q60636 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prdm1Q60636 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Prdm1Q60636 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prdm1Q60636 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.27□□□□□ -0.13
Prdm1Q60636 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm11989-201ENSMUST00000117240 672 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm11362-201ENSMUST00000118838 850 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm9230-201ENSMUST00000188228 532 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Rprl1-202ENSMUST00000198476 238 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm19187-201ENSMUST00000206781 892 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Prdm1Q60636 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.26□□□□□ -0.13
Prdm1Q60636 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prdm1Q60636 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.26□□□□□ -0.13
Prdm1Q60636 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.25□□□□□ -0.13
Prdm1Q60636 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.25□□□□□ -0.13
Prdm1Q60636 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms