Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm15240-201ENSMUST00000118156 720 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm38144-201ENSMUST00000192790 465 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Trav3-3Q5R1C3 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms