Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm11803-201ENSMUST00000119966 444 ntBASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm16177-201ENSMUST00000120728 718 ntBASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm18054-201ENSMUST00000207539 555 ntBASIC12.7□□□□□ -0.38
Trim80Q3V061 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Gm10156-201ENSMUST00000122364 462 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Gm3961-201ENSMUST00000204425 994 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.69□□□□□ -0.38
Trim80Q3V061 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim80Q3V061 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim80Q3V061 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.68□□□□□ -0.38
Trim80Q3V061 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.68□□□□□ -0.38
Trim80Q3V061 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.68□□□□□ -0.38
Trim80Q3V061 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.68□□□□□ -0.38
Trim80Q3V061 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim80Q3V061 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim80Q3V061 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim80Q3V061 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim80Q3V061 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim80Q3V061 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim80Q3V061 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim80Q3V061 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim80Q3V061 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim80Q3V061 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms