Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm14921-201ENSMUST00000118643 908 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm13829-201ENSMUST00000119600 138 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm11803-201ENSMUST00000119966 444 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm14704-201ENSMUST00000120300 874 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm24196-201ENSMUST00000179161 110 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm6266-201ENSMUST00000203844 806 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm7561-201ENSMUST00000211203 886 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm6091-201ENSMUST00000098307 165 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Shisa3Q3UPR0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm24231-201ENSMUST00000104315 133 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm12390-201ENSMUST00000117897 397 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm14127-201ENSMUST00000117906 678 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm10156-201ENSMUST00000122364 462 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm8810-201ENSMUST00000172895 754 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.61□□□□□ -0.71
Shisa3Q3UPR0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Shisa3Q3UPR0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa3Q3UPR0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa3Q3UPR0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa3Q3UPR0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms