Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Gm29410-201ENSMUST00000188383 694 ntBASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Gm17825-201ENSMUST00000206836 794 ntBASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 AC154257.1-202ENSMUST00000224729 843 ntBASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Gm21358-201ENSMUST00000191645 1659 ntBASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Arhgef40Q3UPH7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm12218-201ENSMUST00000117666 399 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm11422-201ENSMUST00000118925 1103 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm12030-201ENSMUST00000121917 223 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm43778-201ENSMUST00000199438 199 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Gm23105-201ENSMUST00000083719 134 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Arhgef40Q3UPH7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm25766-201ENSMUST00000104101 131 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm45594-201ENSMUST00000211717 241 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm11244-201ENSMUST00000121243 237 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm18059-201ENSMUST00000208073 580 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Gm45856-201ENSMUST00000212752 416 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 AC134869.4-202ENSMUST00000224350 837 ntBASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Arhgef40Q3UPH7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Arhgef40Q3UPH7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 187 ms