Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm23270-201ENSMUST00000104055 131 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm9083-201ENSMUST00000120423 819 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm2546-201ENSMUST00000182630 991 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm38317-201ENSMUST00000195564 343 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm42599-201ENSMUST00000201308 469 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm5950-201ENSMUST00000213337 772 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm44967-201ENSMUST00000207047 631 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm18212-201ENSMUST00000211678 889 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Nsd1-205ENSMUST00000224693 852 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm10076-201ENSMUST00000073238 384 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.4□□□□□ -0.1
Limch1Q3UH68 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limch1Q3UH68 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Limch1Q3UH68 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.39□□□□□ -0.11
Limch1Q3UH68 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Gm25214-201ENSMUST00000104573 129 ntBASIC14.39□□□□□ -0.11
Limch1Q3UH68 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Gm15276-201ENSMUST00000145953 498 ntBASIC14.39□□□□□ -0.11
Limch1Q3UH68 Gm2260-201ENSMUST00000184965 657 ntBASIC14.39□□□□□ -0.11
Limch1Q3UH68 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limch1Q3UH68 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms