Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm12943-201ENSMUST00000119616 210 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm12791-201ENSMUST00000120788 655 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm5706-201ENSMUST00000181525 993 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm42433-201ENSMUST00000196806 940 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.34□□□□□ -0.11
Col5a2Q3U962 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.34□□□□□ -0.11
Col5a2Q3U962 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col5a2Q3U962 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col5a2Q3U962 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm13019-201ENSMUST00000120000 276 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm17192-201ENSMUST00000169031 511 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm17931-201ENSMUST00000208132 634 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gm18041-201ENSMUST00000218210 618 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.33□□□□□ -0.12
Col5a2Q3U962 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col5a2Q3U962 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm11500-201ENSMUST00000118237 601 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm10807-201ENSMUST00000177134 795 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm39288-201ENSMUST00000210554 446 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm45856-201ENSMUST00000212752 416 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gm2553-201ENSMUST00000215986 605 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.32□□□□□ -0.12
Col5a2Q3U962 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col5a2Q3U962 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col5a2Q3U962 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col5a2Q3U962 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col5a2Q3U962 Gm13117-201ENSMUST00000120894 691 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms