Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm12241-201ENSMUST00000118330 726 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm26956-201ENSMUST00000182176 986 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm8885-201ENSMUST00000189382 598 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gm9368-201ENSMUST00000219348 831 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ctdnep1Q3TP92 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ctdnep1Q3TP92 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ctdnep1Q3TP92 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm12015-201ENSMUST00000117065 843 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm11222-201ENSMUST00000119005 738 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm7722-201ENSMUST00000120646 741 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm21769-201ENSMUST00000211922 111 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdnep1Q3TP92 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Gm14726-201ENSMUST00000120623 896 ntBASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms