Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Rims2-204ENSMUST00000226410 3685 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm8927-201ENSMUST00000181978 981 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm5177-201ENSMUST00000183092 997 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm3222-201ENSMUST00000071282 990 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Gm26670-201ENSMUST00000180429 3287 ntBASIC10.01□□□□□ -0.81
Trim63Q38HM4 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim63Q38HM4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trim63Q38HM4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Gm14859-201ENSMUST00000117752 357 ntBASIC10□□□□□ -0.81
Trim63Q38HM4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Trim63Q38HM4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Trim63Q38HM4 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC10□□□□□ -0.81
Trim63Q38HM4 Gm20614-201ENSMUST00000177106 632 ntBASIC10□□□□□ -0.81
Trim63Q38HM4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trim63Q38HM4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms