Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm25735-201ENSMUST00000175164 215 ntBASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 AC164978.2-201ENSMUST00000226645 857 ntBASIC10.9□□□□□ -0.66
Chd8Q09XV5 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm12774-201ENSMUST00000117881 416 ntBASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm7150-201ENSMUST00000122032 981 ntBASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd8Q09XV5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm24933-201ENSMUST00000103762 110 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm23252-201ENSMUST00000103776 110 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm25569-201ENSMUST00000157175 131 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm26443-201ENSMUST00000179610 110 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm12407-201ENSMUST00000180219 324 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Mir1941-201ENSMUST00000157834 83 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm9578-201ENSMUST00000182354 753 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm32102-201ENSMUST00000196885 241 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm42821-201ENSMUST00000199771 489 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.89□□□□□ -0.67
Chd8Q09XV5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chd8Q09XV5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd8Q09XV5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd8Q09XV5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd8Q09XV5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd8Q09XV5 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms