Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm13045-201ENSMUST00000119019 712 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm9797-202ENSMUST00000218003 294 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.75□□□□□ -0.53
Hoxc4Q08624 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxc4Q08624 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm20426-201ENSMUST00000173657 440 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm2553-201ENSMUST00000215986 605 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.74□□□□□ -0.53
Hoxc4Q08624 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxc4Q08624 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm23251-201ENSMUST00000103773 110 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm11663-201ENSMUST00000117888 290 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms