Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm12380-201ENSMUST00000119012 544 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm11450-201ENSMUST00000121144 333 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm5051-201ENSMUST00000204085 485 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.43□□□□□ -0.42
Ebf1Q07802 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm45770-201ENSMUST00000212105 616 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.43□□□□□ -0.42
Ebf1Q07802 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf1Q07802 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.42□□□□□ -0.42
Ebf1Q07802 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gm5616-201ENSMUST00000165252 384 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gm8741-201ENSMUST00000174736 384 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gm28071-201ENSMUST00000190355 478 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.42□□□□□ -0.42
Ebf1Q07802 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf1Q07802 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Ebf1Q07802 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms