Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm27046-201ENSMUST00000182160 463 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Mir6420-201ENSMUST00000185032 102 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm3096-201ENSMUST00000185770 364 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm44882-201ENSMUST00000205702 802 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.3□□□□□ -0.6
Col10a1Q05306 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Gm10312-201ENSMUST00000078515 489 ntBASIC11.3□□□□□ -0.6
Col10a1Q05306 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col10a1Q05306 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col10a1Q05306 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm11930-201ENSMUST00000117788 190 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm20482-202ENSMUST00000174729 825 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm27320-201ENSMUST00000184892 109 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.29□□□□□ -0.6
Col10a1Q05306 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col10a1Q05306 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Col10a1Q05306 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col10a1Q05306 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms