Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm26286-201ENSMUST00000104166 134 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.66□□□□□ -0.38
Sox9Q04887 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm24398-201ENSMUST00000157870 109 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm29410-201ENSMUST00000188383 694 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm3551-201ENSMUST00000190750 664 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Gm44958-201ENSMUST00000203734 736 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm45575-201ENSMUST00000210283 548 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox9Q04887 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.66□□□□□ -0.38
Sox9Q04887 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox9Q04887 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox9Q04887 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm22920-201ENSMUST00000102175 109 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Gm14193-201ENSMUST00000105067 153 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Gm14274-201ENSMUST00000117182 615 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Gm12036-201ENSMUST00000120008 530 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Gm45500-201ENSMUST00000211676 803 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox9Q04887 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.65□□□□□ -0.38
Sox9Q04887 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox9Q04887 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox9Q04887 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox9Q04887 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox9Q04887 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox9Q04887 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox9Q04887 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Gm11511-201ENSMUST00000118146 540 ntBASIC12.64□□□□□ -0.39
Sox9Q04887 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox9Q04887 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.64□□□□□ -0.39
Sox9Q04887 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox9Q04887 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 Gm15744-201ENSMUST00000161734 213 ntBASIC12.64□□□□□ -0.39
Sox9Q04887 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox9Q04887 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox9Q04887 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.64□□□□□ -0.39
Sox9Q04887 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
Sox9Q04887 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms