Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
GabpaQ00422 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12616-201ENSMUST00000118594 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm8566-201ENSMUST00000120174 465 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.86□□□□□ -0.19
GabpaQ00422 Gm23085-201ENSMUST00000157849 293 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12624-201ENSMUST00000177615 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12621-201ENSMUST00000177760 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12615-201ENSMUST00000177970 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12622-201ENSMUST00000177975 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12627-201ENSMUST00000178412 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12625-201ENSMUST00000179122 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12614-201ENSMUST00000179586 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm12613-201ENSMUST00000180323 382 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm8100-201ENSMUST00000182906 988 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Gm45770-201ENSMUST00000212105 616 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.86□□□□□ -0.19
GabpaQ00422 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GabpaQ00422 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
GabpaQ00422 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.86□□□□□ -0.19
GabpaQ00422 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GabpaQ00422 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GabpaQ00422 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Gm37835-201ENSMUST00000193305 361 ntBASIC13.85□□□□□ -0.19
GabpaQ00422 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.85□□□□□ -0.19
GabpaQ00422 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.85□□□□□ -0.19
GabpaQ00422 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.85□□□□□ -0.19
GabpaQ00422 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.85□□□□□ -0.19
GabpaQ00422 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GabpaQ00422 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GabpaQ00422 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GabpaQ00422 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.85□□□□□ -0.19
GabpaQ00422 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.85□□□□□ -0.19
GabpaQ00422 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GabpaQ00422 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GabpaQ00422 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.84□□□□□ -0.19
GabpaQ00422 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm5419-201ENSMUST00000119301 527 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.84□□□□□ -0.19
GabpaQ00422 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GabpaQ00422 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.84□□□□□ -0.19
GabpaQ00422 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GabpaQ00422 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm37246-201ENSMUST00000192665 835 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm2965-201ENSMUST00000198365 343 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm18893-201ENSMUST00000198416 943 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm8956-201ENSMUST00000203939 825 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.84□□□□□ -0.19
GabpaQ00422 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm1821-202ENSMUST00000227415 750 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms