Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lig3P97386 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Lig3P97386 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.43□□□□□ -0.26
Lig3P97386 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.43□□□□□ -0.26
Lig3P97386 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Lig3P97386 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.43□□□□□ -0.26
Lig3P97386 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.43□□□□□ -0.26
Lig3P97386 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.43□□□□□ -0.26
Lig3P97386 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lig3P97386 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lig3P97386 Gm15547-201ENSMUST00000122152 333 ntBASIC13.43□□□□□ -0.26
Lig3P97386 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.43□□□□□ -0.26
Lig3P97386 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.43□□□□□ -0.26
Lig3P97386 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.43□□□□□ -0.26
Lig3P97386 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.43□□□□□ -0.26
Lig3P97386 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.43□□□□□ -0.26
Lig3P97386 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.43□□□□□ -0.26
Lig3P97386 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.43□□□□□ -0.26
Lig3P97386 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.43□□□□□ -0.26
Lig3P97386 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.43□□□□□ -0.26
Lig3P97386 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lig3P97386 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.42□□□□□ -0.26
Lig3P97386 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.42□□□□□ -0.26
Lig3P97386 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.42□□□□□ -0.26
Lig3P97386 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.42□□□□□ -0.26
Lig3P97386 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Gm2546-201ENSMUST00000182630 991 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.42□□□□□ -0.26
Lig3P97386 Gm44405-201ENSMUST00000198952 126 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.42□□□□□ -0.26
Lig3P97386 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.42□□□□□ -0.26
Lig3P97386 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.42□□□□□ -0.26
Lig3P97386 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.42□□□□□ -0.26
Lig3P97386 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lig3P97386 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lig3P97386 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.41□□□□□ -0.26
Lig3P97386 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Lig3P97386 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lig3P97386 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.41□□□□□ -0.26
Lig3P97386 Gm14109-201ENSMUST00000118814 309 ntBASIC13.41□□□□□ -0.26
Lig3P97386 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.41□□□□□ -0.26
Lig3P97386 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.41□□□□□ -0.26
Lig3P97386 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lig3P97386 Gm17208-201ENSMUST00000168388 535 ntBASIC13.41□□□□□ -0.26
Lig3P97386 Gm8885-201ENSMUST00000189382 598 ntBASIC13.41□□□□□ -0.26
Lig3P97386 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.41□□□□□ -0.26
Lig3P97386 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms