Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim43cP86449 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim43cP86449 Gm15547-201ENSMUST00000122152 333 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim43cP86449 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim43cP86449 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Trim43cP86449 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim43cP86449 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.31□□□□□ -0.28
Trim43cP86449 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim43cP86449 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Gm6963-201ENSMUST00000147879 379 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim43cP86449 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Gm5706-201ENSMUST00000181525 993 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Gm31256-201ENSMUST00000194705 506 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43cP86449 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Trim43cP86449 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43cP86449 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43cP86449 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43cP86449 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.3□□□□□ -0.28
Trim43cP86449 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim43cP86449 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Gm23912-201ENSMUST00000104687 87 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim43cP86449 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim43cP86449 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim43cP86449 Gm3096-201ENSMUST00000185770 364 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Gm43179-201ENSMUST00000198797 275 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim43cP86449 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim43cP86449 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.29□□□□□ -0.28
Trim43cP86449 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43cP86449 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms