Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msx3P70354 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Msx3P70354 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Gm12036-201ENSMUST00000120008 530 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.57□□□□□ -0.4
Msx3P70354 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.57□□□□□ -0.4
Msx3P70354 Gm19309-201ENSMUST00000218295 205 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msx3P70354 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msx3P70354 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.57□□□□□ -0.4
Msx3P70354 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx3P70354 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx3P70354 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx3P70354 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Msx3P70354 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Gm11793-201ENSMUST00000120433 981 ntBASIC12.56□□□□□ -0.4
Msx3P70354 Gm14832-201ENSMUST00000121289 322 ntBASIC12.56□□□□□ -0.4
Msx3P70354 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx3P70354 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.56□□□□□ -0.4
Msx3P70354 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Gm7046-201ENSMUST00000221351 977 ntBASIC12.56□□□□□ -0.4
Msx3P70354 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.56□□□□□ -0.4
Msx3P70354 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx3P70354 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx3P70354 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms