Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.12□□□□□ -0.47
Crnkl1P63154 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.12□□□□□ -0.47
Crnkl1P63154 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.12□□□□□ -0.47
Crnkl1P63154 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.11□□□□□ -0.47
Crnkl1P63154 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm5186-201ENSMUST00000218781 920 ntBASIC12.11□□□□□ -0.47
Crnkl1P63154 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.11□□□□□ -0.47
Crnkl1P63154 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crnkl1P63154 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.1□□□□□ -0.47
Crnkl1P63154 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.1□□□□□ -0.47
Crnkl1P63154 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm14760-201ENSMUST00000121831 999 ntBASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.1□□□□□ -0.47
Crnkl1P63154 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Crnkl1P63154 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm27892-201ENSMUST00000185017 106 ntBASIC12.1□□□□□ -0.47
Crnkl1P63154 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crnkl1P63154 Gm2495-201ENSMUST00000191160 466 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms