Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ThraP63058 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ThraP63058 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ThraP63058 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ThraP63058 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ThraP63058 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.41□□□□□ -0.42
ThraP63058 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.41□□□□□ -0.42
ThraP63058 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.41□□□□□ -0.42
ThraP63058 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.41□□□□□ -0.42
ThraP63058 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.41□□□□□ -0.42
ThraP63058 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.41□□□□□ -0.42
ThraP63058 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.41□□□□□ -0.42
ThraP63058 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.41□□□□□ -0.42
ThraP63058 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.41□□□□□ -0.42
ThraP63058 Gm5904-201ENSMUST00000210286 865 ntBASIC12.41□□□□□ -0.42
ThraP63058 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ThraP63058 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ThraP63058 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ThraP63058 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ThraP63058 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm24830-201ENSMUST00000102024 166 ntBASIC12.4□□□□□ -0.42
ThraP63058 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.4□□□□□ -0.42
ThraP63058 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm25890-201ENSMUST00000177643 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm22614-201ENSMUST00000178300 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.4□□□□□ -0.42
ThraP63058 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.4□□□□□ -0.42
ThraP63058 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.4□□□□□ -0.42
ThraP63058 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.4□□□□□ -0.42
ThraP63058 Gm5363-201ENSMUST00000211927 938 ntBASIC12.4□□□□□ -0.42
ThraP63058 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ThraP63058 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm22042-201ENSMUST00000082989 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm26232-201ENSMUST00000083360 166 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm24136-201ENSMUST00000083374 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.4□□□□□ -0.42
ThraP63058 Gm26110-201ENSMUST00000083971 165 ntBASIC12.4□□□□□ -0.42
ThraP63058 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.4□□□□□ -0.42
ThraP63058 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ThraP63058 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.4□□□□□ -0.43
ThraP63058 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.4□□□□□ -0.43
ThraP63058 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms