Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Gm17391-201ENSMUST00000171036 126 ntBASIC12.54□□□□□ -0.4
Ybx1P62960 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.54□□□□□ -0.4
Ybx1P62960 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Ybx1P62960 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Ginm1-202ENSMUST00000065124 300 ntBASIC12.54□□□□□ -0.4
Ybx1P62960 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Gm26448-201ENSMUST00000082446 203 ntBASIC12.54□□□□□ -0.4
Ybx1P62960 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Pck2-205ENSMUST00000226352 2784 ntBASIC12.54□□□□□ -0.4
Ybx1P62960 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ybx1P62960 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ybx1P62960 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ybx1P62960 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.53□□□□□ -0.4
Ybx1P62960 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Gm12029-201ENSMUST00000120073 832 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.53□□□□□ -0.4
Ybx1P62960 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.53□□□□□ -0.4
Ybx1P62960 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.53□□□□□ -0.4
Ybx1P62960 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.53□□□□□ -0.4
Ybx1P62960 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.53□□□□□ -0.4
Ybx1P62960 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.53□□□□□ -0.4
Ybx1P62960 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.53□□□□□ -0.4
Ybx1P62960 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ybx1P62960 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Ybx1P62960 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ybx1P62960 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.52□□□□□ -0.4
Ybx1P62960 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.52□□□□□ -0.4
Ybx1P62960 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ybx1P62960 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ybx1P62960 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ybx1P62960 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ybx1P62960 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms