Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm28693-202ENSMUST00000190758 331 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm6458-201ENSMUST00000211573 635 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm45880-201ENSMUST00000213041 853 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm9823-201ENSMUST00000051212 327 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.8□□□□□ -0.68
Sec61a1P61620 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.8□□□□□ -0.68
Sec61a1P61620 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gm26927-201ENSMUST00000182385 965 ntBASIC10.8□□□□□ -0.68
Sec61a1P61620 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.8□□□□□ -0.68
Sec61a1P61620 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a1P61620 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a1P61620 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sec61a1P61620 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm11978-201ENSMUST00000122315 466 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms