Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC8.79□□□□□ -1
Ube2d3P61079 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Gm38092-201ENSMUST00000195600 653 ntBASIC8.79□□□□□ -1
Ube2d3P61079 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.79□□□□□ -1
Ube2d3P61079 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ube2d3P61079 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ube2d3P61079 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ube2d3P61079 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Ube2d3P61079 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Ube2d3P61079 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.79□□□□□ -1
Ube2d3P61079 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ube2d3P61079 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.79□□□□□ -1
Ube2d3P61079 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube2d3P61079 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube2d3P61079 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.78□□□□□ -1
Ube2d3P61079 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Ube2d3P61079 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Gm13492-201ENSMUST00000119772 665 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Gm12490-201ENSMUST00000120255 560 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC8.78□□□□□ -1
Ube2d3P61079 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Gm7029-201ENSMUST00000173226 450 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Gm27839-201ENSMUST00000184242 106 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Ighv1-60-201ENSMUST00000195816 405 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC8.78□□□□□ -1
Ube2d3P61079 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.78□□□□□ -1
Ube2d3P61079 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Ube2d3P61079 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube2d3P61079 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube2d3P61079 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
Ube2d3P61079 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube2d3P61079 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Ube2d3P61079 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Ube2d3P61079 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ube2d3P61079 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.77□□□□□ -1.01
Ube2d3P61079 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Ube2d3P61079 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube2d3P61079 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms