Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm5035-201ENSMUST00000215581 927 ntBASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm32025-201ENSMUST00000217960 307 ntBASIC10.87□□□□□ -0.67
Sf3b6P59708 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.86□□□□□ -0.67
Sf3b6P59708 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sf3b6P59708 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm11814-201ENSMUST00000119515 929 ntBASIC10.86□□□□□ -0.67
Sf3b6P59708 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.86□□□□□ -0.67
Sf3b6P59708 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sf3b6P59708 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm13612-201ENSMUST00000119276 390 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Proscos-202ENSMUST00000178990 666 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms