Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Nup43P59235 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm14716-201ENSMUST00000120138 718 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.56□□□□□ -0.56
Nup43P59235 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.56□□□□□ -0.56
Nup43P59235 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm25668-201ENSMUST00000157700 129 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.56□□□□□ -0.56
Nup43P59235 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.56□□□□□ -0.56
Nup43P59235 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.56□□□□□ -0.56
Nup43P59235 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Nup43P59235 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.56□□□□□ -0.56
Nup43P59235 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nup43P59235 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Nup43P59235 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nup43P59235 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Gm12015-201ENSMUST00000117065 843 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.55□□□□□ -0.56
Nup43P59235 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.55□□□□□ -0.56
Nup43P59235 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Gm17376-201ENSMUST00000166016 84 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Gm5070-201ENSMUST00000177599 862 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Gm8885-201ENSMUST00000189382 598 ntBASIC11.55□□□□□ -0.56
Nup43P59235 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Nup43P59235 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.55□□□□□ -0.56
Nup43P59235 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.55□□□□□ -0.56
Nup43P59235 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nup43P59235 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms