Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.23□□□□□ -0.45
Lim2P56563 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.23□□□□□ -0.45
Lim2P56563 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lim2P56563 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Gm24830-201ENSMUST00000102024 166 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.23□□□□□ -0.45
Lim2P56563 Gm15276-201ENSMUST00000145953 498 ntBASIC12.23□□□□□ -0.45
Lim2P56563 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.23□□□□□ -0.45
Lim2P56563 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Lim2P56563 Gm25890-201ENSMUST00000177643 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm22614-201ENSMUST00000178300 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm38241-201ENSMUST00000192641 898 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm4857-201ENSMUST00000192718 785 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm38317-201ENSMUST00000195564 343 ntBASIC12.23□□□□□ -0.45
Lim2P56563 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Gm22042-201ENSMUST00000082989 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm26232-201ENSMUST00000083360 166 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gm26110-201ENSMUST00000083971 165 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
Lim2P56563 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.23□□□□□ -0.45
Lim2P56563 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lim2P56563 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Gm24934-201ENSMUST00000103764 111 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Mir877-201ENSMUST00000104738 85 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.22□□□□□ -0.45
Lim2P56563 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.22□□□□□ -0.45
Lim2P56563 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.22□□□□□ -0.45
Lim2P56563 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.22□□□□□ -0.45
Lim2P56563 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 AA914427-201ENSMUST00000193194 1166 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Gm42599-201ENSMUST00000201308 469 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Gm44967-201ENSMUST00000207047 631 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lim2P56563 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.22□□□□□ -0.45
Lim2P56563 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lim2P56563 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms