Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdh11P55288 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdh11P55288 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh11P55288 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cdh11P55288 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Gm14723-201ENSMUST00000118686 215 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Gm11793-201ENSMUST00000120433 981 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.17□□□□□ -0.62
Cdh11P55288 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 Gm43822-201ENSMUST00000200285 476 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Gm42599-201ENSMUST00000201308 469 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 Gm3961-201ENSMUST00000204425 994 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cdh11P55288 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Cdh11P55288 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cdh11P55288 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.17□□□□□ -0.62
Cdh11P55288 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.17□□□□□ -0.62
Cdh11P55288 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh11P55288 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.16□□□□□ -0.62
Cdh11P55288 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.16□□□□□ -0.62
Cdh11P55288 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.16□□□□□ -0.62
Cdh11P55288 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.16□□□□□ -0.62
Cdh11P55288 Gm27516-201ENSMUST00000184237 98 ntBASIC11.16□□□□□ -0.62
Cdh11P55288 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.16□□□□□ -0.62
Cdh11P55288 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.16□□□□□ -0.62
Cdh11P55288 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cdh11P55288 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms