Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Nub1P54729 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.22□□□□□ -0.29
Nub1P54729 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Gm38341-201ENSMUST00000195357 515 ntBASIC13.22□□□□□ -0.29
Nub1P54729 Gm44958-201ENSMUST00000203734 736 ntBASIC13.22□□□□□ -0.29
Nub1P54729 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nub1P54729 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.22□□□□□ -0.29
Nub1P54729 Olfr582-201ENSMUST00000098212 960 ntBASIC13.22□□□□□ -0.29
Nub1P54729 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nub1P54729 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nub1P54729 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.21□□□□□ -0.29
Nub1P54729 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nub1P54729 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Gm23270-201ENSMUST00000104055 131 ntBASIC13.21□□□□□ -0.29
Nub1P54729 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nub1P54729 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Nub1P54729 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.21□□□□□ -0.29
Nub1P54729 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nub1P54729 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Gm43822-201ENSMUST00000200285 476 ntBASIC13.21□□□□□ -0.29
Nub1P54729 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Nub1P54729 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nub1P54729 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nub1P54729 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nub1P54729 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nub1P54729 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Nub1P54729 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nub1P54729 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nub1P54729 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nub1P54729 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nub1P54729 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Nub1P54729 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.2□□□□□ -0.3
Nub1P54729 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.2□□□□□ -0.3
Nub1P54729 Gm14726-201ENSMUST00000120623 896 ntBASIC13.2□□□□□ -0.3
Nub1P54729 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.2□□□□□ -0.3
Nub1P54729 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Nub1P54729 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.2□□□□□ -0.3
Nub1P54729 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.2□□□□□ -0.3
Nub1P54729 Gm8712-201ENSMUST00000221090 701 ntBASIC13.2□□□□□ -0.3
Nub1P54729 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms