Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Atxn1P54254 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.19□□□□□ -0.46
Atxn1P54254 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atxn1P54254 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atxn1P54254 Mir874-201ENSMUST00000104769 76 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.18□□□□□ -0.46
Atxn1P54254 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm21811-201ENSMUST00000096485 930 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atxn1P54254 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atxn1P54254 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.18□□□□□ -0.46
Atxn1P54254 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atxn1P54254 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Atxn1P54254 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.17□□□□□ -0.46
Atxn1P54254 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm12501-201ENSMUST00000119163 529 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm12628-201ENSMUST00000122193 382 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Atxn1P54254 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atxn1P54254 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Atxn1P54254 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.17□□□□□ -0.46
Atxn1P54254 Gm45398-201ENSMUST00000210561 165 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.17□□□□□ -0.46
Atxn1P54254 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms