Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir326-201ENSMUST00000083637 95 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Sox1P53783 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox1P53783 Gm10169-201ENSMUST00000121822 348 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox1P53783 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Sox1P53783 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox1P53783 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Gm25677-201ENSMUST00000174983 72 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Gm8756-201ENSMUST00000183250 929 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox1P53783 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox1P53783 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.49□□□□□ -0.41
Sox1P53783 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox1P53783 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox1P53783 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Sox1P53783 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox1P53783 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox1P53783 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox1P53783 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm11957-201ENSMUST00000118304 779 ntBASIC12.48□□□□□ -0.41
Sox1P53783 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.48□□□□□ -0.41
Sox1P53783 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.48□□□□□ -0.41
Sox1P53783 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.48□□□□□ -0.41
Sox1P53783 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox1P53783 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms