Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdx1P52946 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm14109-201ENSMUST00000118814 309 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm17376-201ENSMUST00000166016 84 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm20482-202ENSMUST00000174729 825 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Gm27390-201ENSMUST00000184516 176 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Mir6420-201ENSMUST00000185032 102 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pdx1P52946 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pdx1P52946 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pdx1P52946 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.09□□□□□ -0.47
Pdx1P52946 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pdx1P52946 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Pdx1P52946 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.09□□□□□ -0.47
Pdx1P52946 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdx1P52946 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Pdx1P52946 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pdx1P52946 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdx1P52946 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Pdx1P52946 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdx1P52946 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.08□□□□□ -0.48
Pdx1P52946 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdx1P52946 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Gm12015-201ENSMUST00000117065 843 ntBASIC12.08□□□□□ -0.48
Pdx1P52946 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Rprl1-201ENSMUST00000158050 327 ntBASIC12.08□□□□□ -0.48
Pdx1P52946 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.08□□□□□ -0.48
Pdx1P52946 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.08□□□□□ -0.48
Pdx1P52946 Gzmn-202ENSMUST00000225535 989 ntBASIC12.08□□□□□ -0.48
Pdx1P52946 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms