Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Gm9083-201ENSMUST00000120423 819 ntBASIC11.33□□□□□ -0.6
Ccr4P51680 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Ccr4P51680 Gm37201-201ENSMUST00000191845 523 ntBASIC11.33□□□□□ -0.6
Ccr4P51680 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.33□□□□□ -0.6
Ccr4P51680 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccr4P51680 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccr4P51680 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.33□□□□□ -0.6
Ccr4P51680 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Gm24136-201ENSMUST00000083374 165 ntBASIC11.33□□□□□ -0.6
Ccr4P51680 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccr4P51680 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccr4P51680 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccr4P51680 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccr4P51680 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccr4P51680 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccr4P51680 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccr4P51680 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ccr4P51680 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccr4P51680 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm13736-201ENSMUST00000119272 253 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccr4P51680 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm24548-201ENSMUST00000158650 108 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm27514-201ENSMUST00000183692 110 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm45880-201ENSMUST00000213041 853 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm10076-201ENSMUST00000073238 384 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccr4P51680 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccr4P51680 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccr4P51680 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.32□□□□□ -0.6
Ccr4P51680 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccr4P51680 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccr4P51680 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccr4P51680 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms