Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lhx3P50481 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lhx3P50481 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm22133-201ENSMUST00000102082 109 ntBASIC12.37□□□□□ -0.43
Lhx3P50481 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm14028-201ENSMUST00000117434 479 ntBASIC12.37□□□□□ -0.43
Lhx3P50481 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.37□□□□□ -0.43
Lhx3P50481 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.37□□□□□ -0.43
Lhx3P50481 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm18893-201ENSMUST00000198416 943 ntBASIC12.37□□□□□ -0.43
Lhx3P50481 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.37□□□□□ -0.43
Lhx3P50481 Gm17931-201ENSMUST00000208132 634 ntBASIC12.37□□□□□ -0.43
Lhx3P50481 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lhx3P50481 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lhx3P50481 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lhx3P50481 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx3P50481 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Lhx3P50481 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 Gm23949-201ENSMUST00000104027 127 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm14277-201ENSMUST00000121195 360 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm17827-201ENSMUST00000211825 742 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.36□□□□□ -0.43
Lhx3P50481 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx3P50481 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lhx3P50481 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx3P50481 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx3P50481 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx3P50481 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms