Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm18473-201ENSMUST00000220543 868 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.13□□□□□ -0.79
Nkx2-1P50220 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-1P50220 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.12□□□□□ -0.79
Nkx2-1P50220 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms