Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gm14213-201ENSMUST00000119778 768 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Brca1P48754 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
Brca1P48754 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Brca1P48754 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.49□□□□□ -0.25
Brca1P48754 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gm11578-201ENSMUST00000118530 459 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm21778-201ENSMUST00000178779 471 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm9135-201ENSMUST00000182963 990 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.48□□□□□ -0.25
Brca1P48754 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.48□□□□□ -0.25
Brca1P48754 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.48□□□□□ -0.25
Brca1P48754 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Brca1P48754 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm12453-201ENSMUST00000121981 331 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Gm43852-201ENSMUST00000202098 917 ntBASIC13.48□□□□□ -0.25
Brca1P48754 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Brca1P48754 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Brca1P48754 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Brca1P48754 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Gm24248-201ENSMUST00000157321 322 ntBASIC13.47□□□□□ -0.25
Brca1P48754 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.47□□□□□ -0.25
Brca1P48754 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Brca1P48754 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.47□□□□□ -0.25
Brca1P48754 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Gm23105-201ENSMUST00000083719 134 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms