Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.84□□□□□ -0.35
LmnaP48678 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.84□□□□□ -0.35
LmnaP48678 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LmnaP48678 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LmnaP48678 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LmnaP48678 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.84□□□□□ -0.35
LmnaP48678 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LmnaP48678 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LmnaP48678 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LmnaP48678 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.83□□□□□ -0.36
LmnaP48678 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LmnaP48678 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Gm11531-201ENSMUST00000117614 555 ntBASIC12.83□□□□□ -0.36
LmnaP48678 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.83□□□□□ -0.36
LmnaP48678 Gm12502-201ENSMUST00000120197 444 ntBASIC12.83□□□□□ -0.36
LmnaP48678 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.83□□□□□ -0.36
LmnaP48678 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.83□□□□□ -0.36
LmnaP48678 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.83□□□□□ -0.36
LmnaP48678 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.83□□□□□ -0.36
LmnaP48678 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.83□□□□□ -0.36
LmnaP48678 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LmnaP48678 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.83□□□□□ -0.36
LmnaP48678 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LmnaP48678 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LmnaP48678 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm14109-201ENSMUST00000118814 309 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm38216-201ENSMUST00000194872 1214 ntBASIC12.82□□□□□ -0.36
LmnaP48678 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.82□□□□□ -0.36
LmnaP48678 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.82□□□□□ -0.36
LmnaP48678 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm26226-201ENSMUST00000082509 116 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.82□□□□□ -0.36
LmnaP48678 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms