Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
GdnfP48540 Mir686-201ENSMUST00000102174 109 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Gm12390-201ENSMUST00000117897 397 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Gm16479-201ENSMUST00000121706 932 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Gm17150-201ENSMUST00000165577 381 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC10.77□□□□□ -0.69
GdnfP48540 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.77□□□□□ -0.69
GdnfP48540 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.77□□□□□ -0.69
GdnfP48540 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
GdnfP48540 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
GdnfP48540 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
GdnfP48540 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
GdnfP48540 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
GdnfP48540 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
GdnfP48540 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
GdnfP48540 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gm12439-201ENSMUST00000117162 365 ntBASIC10.76□□□□□ -0.69
GdnfP48540 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.76□□□□□ -0.69
GdnfP48540 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
GdnfP48540 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.76□□□□□ -0.69
GdnfP48540 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.76□□□□□ -0.69
GdnfP48540 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
GdnfP48540 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.75□□□□□ -0.69
GdnfP48540 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
GdnfP48540 Gm4984-201ENSMUST00000115987 360 ntBASIC10.75□□□□□ -0.69
GdnfP48540 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
GdnfP48540 Gm4271-201ENSMUST00000174444 973 ntBASIC10.75□□□□□ -0.69
GdnfP48540 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.75□□□□□ -0.69
GdnfP48540 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms