Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm10076-201ENSMUST00000073238 384 ntBASIC11.8□□□□□ -0.52
Tnfsf4P43488 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.8□□□□□ -0.52
Tnfsf4P43488 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm13342-201ENSMUST00000121055 207 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.79□□□□□ -0.52
Tnfsf4P43488 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf4P43488 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsf4P43488 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.78□□□□□ -0.52
Tnfsf4P43488 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.78□□□□□ -0.52
Tnfsf4P43488 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Gm24830-201ENSMUST00000102024 166 ntBASIC11.78□□□□□ -0.52
Tnfsf4P43488 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfsf4P43488 Gm7809-201ENSMUST00000153199 742 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms