Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox6P40645 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Gm12291-201ENSMUST00000121627 311 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox6P40645 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox6P40645 Snora78-201ENSMUST00000158630 128 ntBASIC11.51□□□□□ -0.57
Sox6P40645 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.51□□□□□ -0.57
Sox6P40645 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox6P40645 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox6P40645 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox6P40645 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Map1b-203ENSMUST00000223725 2669 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox6P40645 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox6P40645 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox6P40645 Gm23363-201ENSMUST00000175024 79 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Gm35960-201ENSMUST00000202712 767 ntBASIC11.5□□□□□ -0.57
Sox6P40645 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox6P40645 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox6P40645 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Sox6P40645 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.5□□□□□ -0.57
Sox6P40645 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms