Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cdh4P39038 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh4P39038 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gm24934-201ENSMUST00000103764 111 ntBASIC11.74□□□□□ -0.53
Cdh4P39038 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.74□□□□□ -0.53
Cdh4P39038 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.74□□□□□ -0.53
Cdh4P39038 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cdh4P39038 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh4P39038 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.74□□□□□ -0.53
Cdh4P39038 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh4P39038 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh4P39038 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdh4P39038 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.73□□□□□ -0.53
Cdh4P39038 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.73□□□□□ -0.53
Cdh4P39038 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cdh4P39038 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.73□□□□□ -0.53
Cdh4P39038 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh4P39038 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh4P39038 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Cdh4P39038 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdh4P39038 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms